My Bibliography

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Zeno EE, Obala AA, Pence B, Freedman E, Mangeni JN, Lin JT, Abel L, Edwards JK, Gower EW, Taylor SM. Risk of Malaria Following Untreated Subpatent Plasmodium falciparum Infections: Results Over 4 Years From a Cohort in a High-Transmission Area in Western Kenya. J Infect Dis. 2024 Apr 12;229(4):969-978. doi: 10.1093/infdis/jiad398. PubMed PMID: 37713614; PubMed Central PMCID: PMC11011184.

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Assefa A, Wamae K, Hennelly CM, Ngasala B, Muller M, Kalonji A, Phanzu F, Cunningham CH, Lin JT, Parr JB. Detection of P. malariae using a new rapid isothermal amplification lateral flow assay. Malar J. 2024 Apr 12;23(1):104. doi: 10.1186/s12936-024-04928-9. PubMed PMID: 38609964; PubMed Central PMCID: PMC11015614.

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Ngasala B, Chacky F, Mohamed A, Molteni F, Nyinondi S, Kabula B, Mkali H, Thwai K, Popkin-Hall ZR, Mitchell C, Parr JB, Juliano JJ, Lin JT. Evaluation of Malaria Rapid Diagnostic Test Performance and pfhrp2 Deletion in Tanzania School Surveys, 2017. Am J Trop Med Hyg. 2024 Mar 19;. doi: 10.4269/ajtmh.23-0771. [Epub ahead of print] PubMed PMID: 38507797.

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Connelly SV, Brazeau NF, Msellem M, Ngasala BE, Aydemir Ö, Goel V, Niaré K, Giesbrecht DJ, Popkin-Hall ZR, Hennelly CM, Park Z, Moormann AM, Ong'echa JM, Verity R, Mohammed S, Shija SJ, Mhamilawa LE, Morris U, Mårtensson A, Lin JT, Björkman A, Juliano JJ, Bailey JA. Strong isolation by distance and evidence of population microstructure reflect ongoing Plasmodium falciparum transmission in Zanzibar. medRxiv. 2024 Feb 13;. doi: 10.1101/2023.02.15.23285960. PubMed PMID: 36865135; PubMed Central PMCID: PMC9980253.

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Potlapalli VR, Muller MS, Ngasala B, Ali IM, Na YB, Williams DR, Kharabora O, Chhetri S, Liu MS, Carey-Ewend K, Lin FC, Mathias D, Tarimo BB, Juliano JJ, Parr JB, Lin JT. Real-time PCR detection of mixed Plasmodium ovale curtisi and wallikeri infections in human and mosquito hosts. PLoS Negl Trop Dis. 2023 Dec;17(12):e0011274. doi: 10.1371/journal.pntd.0011274. eCollection 2023 Dec. PubMed PMID: 38064489; PubMed Central PMCID: PMC10732364.

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Sendor R, Banek K, Kashamuka MM, Mvuama N, Bala JA, Nkalani M, Kihuma G, Atibu J, Thwai KL, Svec WM, Goel V, Nseka T, Lin JT, Bailey JA, Emch M, Carrel M, Juliano JJ, Tshefu A, Parr JB. Epidemiology of Plasmodium malariae and Plasmodium ovale spp. in Kinshasa Province, Democratic Republic of Congo. Nat Commun. 2023 Oct 19;14(1):6618. doi: 10.1038/s41467-023-42190-w. PubMed PMID: 37857597; PubMed Central PMCID: PMC10587068.

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Rapp T, Amagai K, Sinai C, Basham C, Loya M, Ngasala S, Said H, Muller MS, Chhetri SB, Yang G, François R, Odas M, Mathias D, Juliano JJ, Lin FC, Ngasala B, Lin JT. Micro-heterogeneity of transmission shapes the submicroscopic malaria reservoir in coastal Tanzania. medRxiv. 2023 Sep 10;. doi: 10.1101/2023.09.06.23295089. PubMed PMID: 37732257; PubMed Central PMCID: PMC10508794.

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Rubinstein RJ, Mei W, Cassidy CA, Streeter G, Basham C, Cerami C, Lin FC, Lin JT, Mollan KR. Transmission prevention behaviors in US households with SARS-CoV-2 cases in 2020. Front Epidemiol. 2023;3. doi: 10.3389/fepid.2023.1160214. Epub 2023 Jun 2. PubMed PMID: 38406213; PubMed Central PMCID: PMC10888502.

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Sendor R, Mitchell CL, Chacky F, Mohamed A, Mhamilawa LE, Molteni F, Nyinondi S, Kabula B, Mkali H, Reaves EJ, Serbantez N, Kitojo C, Makene T, Kyaw T, Muller M, Mwanza A, Eckert EL, Parr JB, Lin JT, Juliano JJ, Ngasala B. Similar Prevalence of Plasmodium falciparum and Non-P. falciparum Malaria Infections among Schoolchildren, Tanzania(1). Emerg Infect Dis. 2023 Jun;29(6):1143-1153. doi: 10.3201/eid2906.221016. PubMed PMID: 37209670; PubMed Central PMCID: PMC10202886.

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Rolfes MA, Talbot HK, McLean HQ, Stockwell MS, Ellingson KD, Lutrick K, Bowman NM, Bendall EE, Bullock A, Chappell JD, Deyoe JE, Gilbert J, Halasa NB, Hart KE, Johnson S, Kim A, Lauring AS, Lin JT, Lindsell CJ, McLaren SH, Meece JK, Mellis AM, Moreno Zivanovich M, Ogokeh CE, Rodriguez M, Sano E, Silverio Francisco RA, Schmitz JE, Vargas CY, Yang A, Zhu Y, Belongia EA, Reed C, Grijalva CG. Household Transmission of Influenza A Viruses in 2021-2022. JAMA. 2023 Feb 14;329(6):482-489. doi: 10.1001/jama.2023.0064. PubMed PMID: 36701144; PubMed Central PMCID: PMC9880862.

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Jiang H, Li Q, Lin JT, Lin FC. Classification of disease recurrence using transition likelihoods with expectation-maximization algorithm. Stat Med. 2022 Oct 15;41(23):4697-4715. doi: 10.1002/sim.9534. Epub 2022 Jul 31. PubMed PMID: 35908812; PubMed Central PMCID: PMC9489660.

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Herman GA, O'Brien MP, Forleo-Neto E, Sarkar N, Isa F, Hou P, Chan KC, Bar KJ, Barnabas RV, Barouch DH, Cohen MS, Hurt CB, Burwen DR, Marovich MA, Musser BJ, Davis JD, Turner KC, Mahmood A, Hooper AT, Hamilton JD, Parrino J, Subramaniam D, Baum A, Kyratsous CA, DiCioccio AT, Stahl N, Braunstein N, Yancopoulos GD, Weinreich DM. Efficacy and safety of a single dose of casirivimab and imdevimab for the prevention of COVID-19 over an 8-month period: a randomised, double-blind, placebo-controlled trial. Lancet Infect Dis. 2022 Oct;22(10):1444-1454. doi: 10.1016/S1473-3099(22)00416-9. Epub 2022 Jul 5. PubMed PMID: 35803290; PubMed Central PMCID: PMC9255947.

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Chen W, Luo H, Zeng L, Pan Y, Parr JB, Jiang Y, Cunningham CH, Hawley KL, Radolf JD, Ke W, Ou J, Yang J, Yang B, Zheng H. A suite of PCR-LwCas13a assays for detection and genotyping of Treponema pallidum in clinical samples. Nat Commun. 2022 Aug 9;13(1):4671. doi: 10.1038/s41467-022-32250-y. PubMed PMID: 35945210; PubMed Central PMCID: PMC9362966.

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Noviyanti R, Carey-Ewend K, Trianty L, Parobek C, Puspitasari AM, Balasubramanian S, Park Z, Hathaway N, Utami RAS, Soebianto S, Jeny J, Yudhaputri F, Perkasa A, Coutrier FN, Tirta YK, Ekawati L, Tjahyono B, Sutanto I, Nelwan EJ, Sudoyo H, Baird JK, Lin JT. Hypnozoite depletion in successive Plasmodium vivax relapses. PLoS Negl Trop Dis. 2022 Jul;16(7):e0010648. doi: 10.1371/journal.pntd.0010648. eCollection 2022 Jul. PubMed PMID: 35867730; PubMed Central PMCID: PMC9348653.

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Figueiredo JC, Hirsch FR, Kushi LH, Nembhard WN, Crawford JM, Mantis N, Finster L, Merin NM, Merchant A, Reckamp KL, Melmed GY, Braun J, McGovern D, Parekh S, Corley DA, Zohoori N, Amick BC, Du R, Gregersen PK, Diamond B, Taioli E, Sariol C, Espino A, Weiskopf D, Gifoni A, Brien J, Hanege W, Lipsitch M, Zidar DA, Scheck McAlearney A, Wajnberg A, LaBaer J, Yvonne Lewis E, Binder RA, Moormann AM, Forconi C, Forrester S, Batista J, Schieffelin J, Kim D, Biancon G, VanOudenhove J, Halene S, Fan R, Barouch DH, Alter G, Pinninti S, Boppana SB, Pati SK, Latting M, Karaba AH, Roback J, Sekaly R, Neish A, Brincks AM, Granger DA, Karger AB, Thyagarajan B, Thomas SN, Klein SL, Cox AL, Lucas T, Furr-Holden D, Key K, Jones N, Wrammerr J, Suthar M, Yu Wong S, Bowman NM, Simon V, Richardson LD, McBride R, Krammer F, Rana M, Kennedy J, Boehme K, Forrest C, Granger SW, Heaney CD, Knight Lapinski M, Wallet S, Baric RS, Schifanella L, Lopez M, Fernández S, Kenah E, Panchal AR, Britt WJ, Sanz I, Dhodapkar M, Ahmed R, Bartelt LA, Markmann AJ, Lin JT, Hagan RS, Wolfgang MC, Skarbinski J. Mission, Organization, and Future Direction of the Serological Sciences Network for COVID-19 (SeroNet) Epidemiologic Cohort Studies. Open Forum Infect Dis. 2022 Jun;9(6):ofac171. doi: 10.1093/ofid/ofac171. eCollection 2022 Jun. PubMed PMID: 35765315; PubMed Central PMCID: PMC9129196.

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Cerami C, Popkin-Hall ZR, Rapp T, Tompkins K, Zhang H, Muller MS, Basham C, Whittelsey M, Chhetri SB, Smith J, Litel C, Lin KD, Churiwal M, Khan S, Rubinstein R, Claman F, Mollan K, Wohl D, Premkumar L, Powers KA, Juliano JJ, Lin FC, Lin JT. Household Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 in the United States: Living Density, Viral Load, and Disproportionate Impact on Communities of Color. Clin Infect Dis. 2022 May 30;74(10):1776-1785. doi: 10.1093/cid/ciab701. PubMed PMID: 34383889; PubMed Central PMCID: PMC8436395.

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Tarimo BB, Nyasembe VO, Ngasala B, Basham C, Rutagi IJ, Muller M, Chhetri SB, Rubinstein R, Juliano JJ, Loya M, Dinglasan RR, Lin JT, Mathias DK. Seasonality and transmissibility of Plasmodium ovale in Bagamoyo District, Tanzania. Parasit Vectors. 2022 Feb 14;15(1):56. doi: 10.1186/s13071-022-05181-2. PubMed PMID: 35164867; PubMed Central PMCID: PMC8842944.

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O'Brien MP, Forleo-Neto E, Sarkar N, Isa F, Hou P, Chan KC, Musser BJ, Bar KJ, Barnabas RV, Barouch DH, Cohen MS, Hurt CB, Burwen DR, Marovich MA, Brown ER, Heirman I, Davis JD, Turner KC, Ramesh D, Mahmood A, Hooper AT, Hamilton JD, Kim Y, Purcell LA, Baum A, Kyratsous CA, Krainson J, Perez-Perez R, Mohseni R, Kowal B, DiCioccio AT, Geba GP, Stahl N, Lipsich L, Braunstein N, Herman G, Yancopoulos GD, Weinreich DM. Effect of Subcutaneous Casirivimab and Imdevimab Antibody Combination vs Placebo on Development of Symptomatic COVID-19 in Early Asymptomatic SARS-CoV-2 Infection: A Randomized Clinical Trial. JAMA. 2022 Feb 1;327(5):432-441. doi: 10.1001/jama.2021.24939. PubMed PMID: 35029629; PubMed Central PMCID: PMC8808333.

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Liu Y, Lin FC, Lin JT, Li Q. Dynamic Classification of Plasmodium vivax Malaria Recurrence: An Application of Classifying Unknown Cause of Failure in Competing Risks. J Data Sci. 2022 Jan;20(1):51-78. doi: 10.6339/21-jds1026. Epub 2021 Dec 9. PubMed PMID: 35928784; PubMed Central PMCID: PMC9347664.

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Churiwal M, Lin KD, Khan S, Chhetri S, Muller MS, Tompkins K, Smith J, Litel C, Whittelsey M, Basham C, Rapp T, Cerami C, Premkumar L, Lin JT. Assessment of the Field Utility of a Rapid Point-of-Care Test for SARS-CoV-2 Antibodies in a Household Cohort. Am J Trop Med Hyg. 2021 Nov 24;106(1):156-159. doi: 10.4269/ajtmh.21-0592. PubMed PMID: 34818625; PubMed Central PMCID: PMC8733539.

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Lin JT, Mollan KR, Cerami C. The Consequences of Isolating at Home. Clin Infect Dis. 2021 Nov 2;73(9):e2823. doi: 10.1093/cid/ciaa1476. PubMed PMID: 32986803.

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Muller MS, Chhetri SB, Basham C, Rapp T, Lin FC, Lin K, Westreich D, Cerami C, Juliano JJ, Lin JT. Practical strategies for SARS-CoV-2 RT-PCR testing in resource-constrained settings. Diagn Microbiol Infect Dis. 2021 Oct;101(2):115469. doi: 10.1016/j.diagmicrobio.2021.115469. Epub 2021 Jun 25. PubMed PMID: 34280773; PubMed Central PMCID: PMC8230941.

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O'Brien MP, Forleo-Neto E, Musser BJ, Isa F, Chan KC, Sarkar N, Bar KJ, Barnabas RV, Barouch DH, Cohen MS, Hurt CB, Burwen DR, Marovich MA, Hou P, Heirman I, Davis JD, Turner KC, Ramesh D, Mahmood A, Hooper AT, Hamilton JD, Kim Y, Purcell LA, Baum A, Kyratsous CA, Krainson J, Perez-Perez R, Mohseni R, Kowal B, DiCioccio AT, Stahl N, Lipsich L, Braunstein N, Herman G, Yancopoulos GD, Weinreich DM. Subcutaneous REGEN-COV Antibody Combination to Prevent Covid-19. N Engl J Med. 2021 Sep 23;385(13):1184-1195. doi: 10.1056/NEJMoa2109682. Epub 2021 Aug 4. PubMed PMID: 34347950; PubMed Central PMCID: PMC8362593.

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Shrestha B, Shah Z, Morgan AP, Saingam P, Chaisatit C, Chaorattanakawee S, Praditpol C, Boonyalai N, Lertsethtakarn P, Wojnarski M, Deutsch-Feldman M, Adams M, Sea D, Chann S, Tyner SD, Lanteri CA, Spring MD, Saunders DL, Smith PL, Lon C, Gosi P, Sok S, Satharath P, Rekol H, Lek D, Vesely BA, Lin JT, Waters NC, Takala-Harrison S. Distribution and Temporal Dynamics of Plasmodium falciparum Chloroquine Resistance Transporter Mutations Associated With Piperaquine Resistance in Northern Cambodia. J Infect Dis. 2021 Sep 17;224(6):1077-1085. doi: 10.1093/infdis/jiab055. PubMed PMID: 33528566; PubMed Central PMCID: PMC8448439.

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Cunningham CH, Hennelly CM, Lin JT, Ubalee R, Boyce RM, Mulogo EM, Hathaway N, Thwai KL, Phanzu F, Kalonji A, Mwandagalirwa K, Tshefu A, Juliano JJ, Parr JB. A novel CRISPR-based malaria diagnostic capable of Plasmodium detection, species differentiation, and drug-resistance genotyping. EBioMedicine. 2021 Jun;68:103415. doi: 10.1016/j.ebiom.2021.103415. Epub 2021 Jun 14. PubMed PMID: 34139428; PubMed Central PMCID: PMC8213918.

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Parr JB, Kieto E, Phanzu F, Mansiangi P, Mwandagalirwa K, Mvuama N, Landela A, Atibu J, Efundu SU, Olenga JW, Thwai KL, Morgan CE, Denton M, Poffley A, Juliano JJ, Mungala P, Likwela JL, Sompwe EM, Rogier E, Tshefu AK, N'Siala A, Kalonji A. Analysis of false-negative rapid diagnostic tests for symptomatic malaria in the Democratic Republic of the Congo. Sci Rep. 2021 Mar 22;11(1):6495. doi: 10.1038/s41598-021-85913-z. PubMed PMID: 33753817; PubMed Central PMCID: PMC7985209.

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Lin JT, Waltmann A, Moser KA, Park Z, Na YB, Aydemir O, Brazeau NF, Gosi P, Marsh PW, Muller MS, Spring M, Sok S, Bailey JA, Saunders DL, Lon C, Wojnarski M. Selection of Cytochrome b Mutants Is Rare among Plasmodium falciparum Patients Failing Treatment with Atovaquone-Proguanil in Cambodia. Antimicrob Agents Chemother. 2021 Feb 17;65(3). doi: 10.1128/AAC.01249-20. Print 2021 Feb 17. PubMed PMID: 33361308; PubMed Central PMCID: PMC8092515.

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Markwalter CF, Ngasala B, Mowatt T, Basham C, Park Z, Loya M, Muller M, Plowe C, Nyunt M, Lin JT. Direct Comparison of Standard and Ultrasensitive PCR for the Detection of Plasmodium falciparum from Dried Blood Spots in Bagamoyo, Tanzania. Am J Trop Med Hyg. 2021 Feb 8;104(4):1371-1374. doi: 10.4269/ajtmh.20-1233. PubMed PMID: 33556035; PubMed Central PMCID: PMC8045654.

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Lin FC, Li Q, Lin JT. Relapse or reinfection: Classification of malaria infection using transition likelihoods. Biometrics. 2020 Dec;76(4):1351-1363. doi: 10.1111/biom.13226. Epub 2020 Mar 3. PubMed PMID: 32022247; PubMed Central PMCID: PMC8711853.

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Spring MD, Lon C, Sok S, Sea D, Wojnarski M, Chann S, Kuntawunginn W, Kheang Heng T, Nou S, Arsanok M, Sriwichai S, Vanachayangkul P, Lin JT, Manning JE, Jongsakul K, Pichyangkul S, Satharath P, Smith PL, Dysoley L, Saunders DL, Waters NC. Prevalence of CYP2D6 Genotypes and Predicted Phenotypes in a Cohort of Cambodians at High Risk for Infections with Plasmodium vivax. Am J Trop Med Hyg. 2020 Aug;103(2):756-759. doi: 10.4269/ajtmh.20-0061. Epub 2020 May 7. PubMed PMID: 32394887; PubMed Central PMCID: PMC7410472.

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Lin JT, Parr JB, Ngasala B. Non-falciparum Malaria in Africa and Learning From Plasmodium vivax in Asia. Clin Infect Dis. 2020 Apr 15;70(9):2018-2019. doi: 10.1093/cid/ciz780. PubMed PMID: 31408098; PubMed Central PMCID: PMC7346758.

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Balasubramanian S, Rahman RS, Lon C, Parobek C, Ubalee R, Hathaway N, Kuntawunginn W, My M, Vy D, Saxe J, Lanteri C, Lin FC, Spring M, Meshnick SR, Juliano JJ, Saunders DL, Lin JT. Efficient Transmission of Mixed Plasmodium falciparum/vivax Infections From Humans to Mosquitoes. J Infect Dis. 2020 Jan 14;221(3):428-437. doi: 10.1093/infdis/jiz388. PubMed PMID: 31549156; PubMed Central PMCID: PMC7184918.

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Boyce RM, Speight C, Lin JT, Farel CE. Errors in Diagnostic Test Use and Interpretation Contribute to the High Number of Lyme Disease Referrals in a Low-Incidence State. Open Forum Infect Dis. 2020 Jan;7(1):ofaa009. doi: 10.1093/ofid/ofaa009. eCollection 2020 Jan. PubMed PMID: 31988970; PubMed Central PMCID: PMC6976340.

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Wojnarski M, Lon C, Vanachayangkul P, Gosi P, Sok S, Rachmat A, Harrison D, Berjohn CM, Spring M, Chaoratanakawee S, Ittiverakul M, Buathong N, Chann S, Wongarunkochakorn S, Waltmann A, Kuntawunginn W, Fukuda MM, Burkly H, Heang V, Heng TK, Kong N, Boonchan T, Chum B, Smith P, Vaughn A, Prom S, Lin J, Lek D, Saunders D. Atovaquone-Proguanil in Combination With Artesunate to Treat Multidrug-Resistant P. falciparum Malaria in Cambodia: An Open-Label Randomized Trial. Open Forum Infect Dis. 2019 Sep;6(9):ofz314. doi: 10.1093/ofid/ofz314. eCollection 2019 Sep. PubMed PMID: 31660398; PubMed Central PMCID: PMC6736354.

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Lin JT, Patel JC, Levitz L, Wojnarski M, Chaorattanakawee S, Gosi P, Buathong N, Chann S, Huy R, Thay K, Sea D, Samon N, Takala-Harrison S, Fukuda M, Smith P, Spring M, Saunders D, Lon C. Gametocyte Carriage, Antimalarial Use, and Drug Resistance in Cambodia, 2008-2014. Am J Trop Med Hyg. 2018 Nov;99(5):1145-1149. doi: 10.4269/ajtmh.18-0509. PubMed PMID: 30226145; PubMed Central PMCID: PMC6221238.

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Manning J, Lon C, Spring M, Wojnarski M, Somethy S, Chann S, Gosi P, Soveasna K, Sriwichai S, Kuntawunginn W, Fukuda MM, Smith PL, Rekol H, Sinoun M, So M, Lin J, Satharath P, Saunders D. Cluster-randomized trial of monthly malaria prophylaxis versus focused screening and treatment: a study protocol to define malaria elimination strategies in Cambodia. Trials. 2018 Oct 16;19(1):558. doi: 10.1186/s13063-018-2931-x. PubMed PMID: 30326952; PubMed Central PMCID: PMC6192281.

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Chaorattanakawee S, Lon C, Chann S, Thay KH, Kong N, You Y, Sundrakes S, Thamnurak C, Chattrakarn S, Praditpol C, Yingyuen K, Wojnarski M, Huy R, Spring MD, Walsh DS, Patel JC, Lin J, Juliano JJ, Lanteri CA, Saunders DL. Measuring ex vivo drug susceptibility in Plasmodium vivax isolates from Cambodia. Malar J. 2017 Sep 30;16(1):392. doi: 10.1186/s12936-017-2034-2. PubMed PMID: 28964258; PubMed Central PMCID: PMC5622433.

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Agrawal S, Moser KA, Morton L, Cummings MP, Parihar A, Dwivedi A, Shetty AC, Drabek EF, Jacob CG, Henrich PP, Parobek CM, Jongsakul K, Huy R, Spring MD, Lanteri CA, Chaorattanakawee S, Lon C, Fukuda MM, Saunders DL, Fidock DA, Lin JT, Juliano JJ, Plowe CV, Silva JC, Takala-Harrison S. Association of a Novel Mutation in the Plasmodium falciparum Chloroquine Resistance Transporter With Decreased Piperaquine Sensitivity. J Infect Dis. 2017 Aug 15;216(4):468-476. doi: 10.1093/infdis/jix334. PubMed PMID: 28931241; PubMed Central PMCID: PMC5853219.

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Lin JT, Lon C, Spring MD, Sok S, Chann S, Ittiverakul M, Kuntawunginn W, My M, Thay K, Rahman R, Balasubramanian S, Char M, Lanteri CA, Gosi P, Ubalee R, Meshnick SR, Saunders DL. Single dose primaquine to reduce gametocyte carriage and Plasmodium falciparum transmission in Cambodia: An open-label randomized trial. PLoS One. 2017;12(6):e0168702. doi: 10.1371/journal.pone.0168702. eCollection 2017. PubMed PMID: 28591198; PubMed Central PMCID: PMC5462369.

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Parobek CM, Parr JB, Brazeau NF, Lon C, Chaorattanakawee S, Gosi P, Barnett EJ, Norris LD, Meshnick SR, Spring MD, Lanteri CA, Bailey JA, Saunders DL, Lin JT, Juliano JJ. Partner-Drug Resistance and Population Substructuring of Artemisinin-Resistant Plasmodium falciparum in Cambodia. Genome Biol Evol. 2017 Jun 1;9(6):1673-1686. doi: 10.1093/gbe/evx126. PubMed PMID: 28854635; PubMed Central PMCID: PMC5522704.

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Bassat Q, Velarde M, Mueller I, Lin J, Leslie T, Wongsrichanalai C, Baird JK. Key Knowledge Gaps for Plasmodium vivax Control and Elimination. Am J Trop Med Hyg. 2016 Dec 28;95(6 Suppl):62-71. doi: 10.4269/ajtmh.16-0180. Epub 2016 Jul 18. PubMed PMID: 27430544; PubMed Central PMCID: PMC5201224.

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Parobek CM, Lin JT, Saunders DL, Barnett EJ, Lon C, Lanteri CA, Balasubramanian S, Brazeau N, DeConti DK, Garba DL, Meshnick SR, Spring MD, Chuor CM, Bailey JA, Juliano JJ. Selective sweep suggests transcriptional regulation may underlie Plasmodium vivax resilience to malaria control measures in Cambodia. Proc Natl Acad Sci U S A. 2016 Dec 13;113(50):E8096-E8105. doi: 10.1073/pnas.1608828113. Epub 2016 Nov 28. PubMed PMID: 27911780; PubMed Central PMCID: PMC5167194.

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Brazeau NF, Hathaway N, Parobek CM, Lin JT, Bailey JA, Lon C, Saunders DL, Juliano JJ. Longitudinal Pooled Deep Sequencing of the Plasmodium vivax K12 Kelch Gene in Cambodia Reveals a Lack of Selection by Artemisinin. Am J Trop Med Hyg. 2016 Dec 7;95(6):1409-1412. doi: 10.4269/ajtmh.16-0566. Epub 2016 Oct 31. PubMed PMID: 27799638; PubMed Central PMCID: PMC5154458.

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Lin JT, Meshnick SR, Saunders DL, Lon C. Reply to Goncalves et al. J Infect Dis. 2016 May 1;213(9):1517. doi: 10.1093/infdis/jiw045. Epub 2016 Feb 9. PubMed PMID: 26908729; PubMed Central PMCID: PMC4813745.

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Lin JT, Ubalee R, Lon C, Balasubramanian S, Kuntawunginn W, Rahman R, Saingam P, Heng TK, Vy D, San S, Nuom S, Burkly H, Chanarat N, Ponsa C, Levitz L, Parobek C, Chuor CM, Somethy S, Spring M, Lanteri C, Gosi P, Meshnick SR, Saunders DL. Microscopic Plasmodium falciparum Gametocytemia and Infectivity to Mosquitoes in Cambodia. J Infect Dis. 2016 May 1;213(9):1491-4. doi: 10.1093/infdis/jiv599. Epub 2015 Dec 13. PubMed PMID: 26667316; PubMed Central PMCID: PMC4813737.

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Chaorattanakawee S, Lanteri CA, Sundrakes S, Yingyuen K, Gosi P, Chanarat N, Wongarunkochakorn S, Buathong N, Chann S, Kuntawunginn W, Arsanok M, Lin JT, Juliano JJ, Tyner SD, Char M, Lon C, Saunders DL. Attenuation of Plasmodium falciparum in vitro drug resistance phenotype following culture adaptation compared to fresh clinical isolates in Cambodia. Malar J. 2015 Dec 2;14:486. doi: 10.1186/s12936-015-1021-8. PubMed PMID: 26626127; PubMed Central PMCID: PMC4667454.

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Lin JT, Hathaway NJ, Saunders DL, Lon C, Balasubramanian S, Kharabora O, Gosi P, Sriwichai S, Kartchner L, Chuor CM, Satharath P, Lanteri C, Bailey JA, Juliano JJ. Using Amplicon Deep Sequencing to Detect Genetic Signatures of Plasmodium vivax Relapse. J Infect Dis. 2015 Sep 15;212(6):999-1008. doi: 10.1093/infdis/jiv142. Epub 2015 Mar 6. PubMed PMID: 25748326; PubMed Central PMCID: PMC4548463.

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Chaorattanakawee S, Saunders DL, Sea D, Chanarat N, Yingyuen K, Sundrakes S, Saingam P, Buathong N, Sriwichai S, Chann S, Se Y, Yom Y, Heng TK, Kong N, Kuntawunginn W, Tangthongchaiwiriya K, Jacob C, Takala-Harrison S, Plowe C, Lin JT, Chuor CM, Prom S, Tyner SD, Gosi P, Teja-Isavadharm P, Lon C, Lanteri CA. Ex Vivo Drug Susceptibility Testing and Molecular Profiling of Clinical Plasmodium falciparum Isolates from Cambodia from 2008 to 2013 Suggest Emerging Piperaquine Resistance. Antimicrob Agents Chemother. 2015 Aug;59(8):4631-43. doi: 10.1128/AAC.00366-15. Epub 2015 May 26. PubMed PMID: 26014942; PubMed Central PMCID: PMC4505231.

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Spring MD, Lin JT, Manning JE, Vanachayangkul P, Somethy S, Bun R, Se Y, Chann S, Ittiverakul M, Sia-ngam P, Kuntawunginn W, Arsanok M, Buathong N, Chaorattanakawee S, Gosi P, Ta-aksorn W, Chanarat N, Sundrakes S, Kong N, Heng TK, Nou S, Teja-isavadharm P, Pichyangkul S, Phann ST, Balasubramanian S, Juliano JJ, Meshnick SR, Chour CM, Prom S, Lanteri CA, Lon C, Saunders DL. Dihydroartemisinin-piperaquine failure associated with a triple mutant including kelch13 C580Y in Cambodia: an observational cohort study. Lancet Infect Dis. 2015 Jun;15(6):683-91. doi: 10.1016/S1473-3099(15)70049-6. Epub 2015 Apr 12. PubMed PMID: 25877962.

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Patel JC, Lucchi NW, Srivastava P, Lin JT, Sug-Aram R, Aruncharus S, Bharti PK, Shukla MM, Congpuong K, Satimai W, Singh N, Udhayakumar V, Meshnick SR. Field evaluation of a real-time fluorescence loop-mediated isothermal amplification assay, RealAmp, for the diagnosis of malaria in Thailand and India. J Infect Dis. 2014 Oct 15;210(8):1180-7. doi: 10.1093/infdis/jiu252. Epub 2014 May 1. PubMed PMID: 24795480; PubMed Central PMCID: PMC6373533.